SHAMAN

Public Server:	SHAMAN (FR)
Scope:	Domain Specific
Summary:	A user-friendly website for metataxonomic analysis from raw reads to statistical analysis

Comments

The [SHAMAN server](https://shaman.pasteur.fr/) does not look like Galaxy, but it uses the [Galaxy@Pasteur server](/use/galaxy-pasteur/) for data analysis and workflow execution.
SHAMAN is a shiny application for differential analysis of metagenomic data (16S, 18S, 23S, 28S, ITS and WGS) including bioinformatics treatment of raw reads for targeted metagenomics, statistical analysis and results visualization with a large variety of plots (barplot, boxplot, heatmap, …).

Anonymous access is supported with a reduced quota; anyone can create an account.

Volant, S., Lechat, P., Woringer, P., Motreff, L., Campagne, P., Malabat, C., Kennedy, S., & Ghozlane, A. (2020). [SHAMAN: A user-friendly website for metataxonomic analysis from raw reads to statistical analysis](https://doi.org/10.1186/s12859-020-03666-4). *BMC Bioinformatics*, 21(1), 345. https://doi.org/10.1186/s12859-020-03666-4
SHAMAN tagged publications in the Galaxy Publication Library