Galaxy Community Hub

Platform Directory

G-OnRamp

Virtual Machine:	G-OnRamp Virtual Machine
Commercial Cloud:	G-OnRamp AMI
Scope:	Domain Specific
Summary:	G-OnRamp provides a user-friendly, web-based platform for collaborative, end-to-end annotation of eukaryotic genomes using UCSC Assembly Hubs and JBrowse/Apollo genome browsers with evidence tracks derived from sequence alignments, ab initio gene predictors, RNA-Seq data, and repeat finders.

Comments

use the G-OnRamp output to visualize large genomics datasets, and can utilize the output to drive collaborative genome annotation projects in both research and educational settings
[Deployment options](http://gonramp.wustl.edu/?page_id=1031)

User Support

[How to use G-OnRamp](http://gonramp.wustl.edu/?page_id=384/#use)
[Learn G-OnRamp](http://old-gep.wustl.edu/~galaxy/gonramp/?page_id=32/#materials)
[Virtual Machine Installation Walkthrough](https://wustl.app.box.com/s/9626q6n2mjnd3vuas26j20w419f5v0fc)
[CloudLaunch Deployment Walkthrough](https://wustl.app.box.com/s/rg7xaezf22p75d8yardsooa2izbdlkd5) (using the AMI)

Quotas

None

Citations

[G-OnRamp: A Galaxy-based platform for creating genome browsers for collaborative genome annotation](https://doi.org/10.1101/499558), Yating Liu, Luke Sargent, Wilson Leung, Sarah C.R. Elgin, [Jeremy Goecks](/people/jeremy-goecks/), *bioRxiv* 499558; doi: 10.1101/499558
G-OnRamp tagged publications in the Galaxy Publication Library

Sponsors

[Washington University in St. Louis](https://wustl.edu/), [Oregon Health & Science University](https://ohsu.edu/)