epiGeEC
Launch Galaxy
| Public Server: | epiGeEC server (CA) |
|---|---|
| Scope: | Tool Publishing |
| Summary: | Compare user-provided epigenomic datasets with thousands of public datasets. |
Comments
- This epiGeEC server is designed to compare user-provided epigenomic datasets with thousands of public datasets in a few minutes. It can also be used to directly compare user’s datasets.
- This public Galaxy framework is provided by the Genetics and genomics Analysis Platform (GenAP) project, thereby leveraging Compute Canada advanced research computing infrastructure.
User Support
- [Tutorial](https://epigeec.genap.ca/galaxy/)
Quotas
- Anonymous access and account creation are both supported.
Citations
- [The epiGenomic Efficient Correlator (epiGeEC) tool allows fast comparison of user datasets with thousands of public epigenomic datasets](https://doi.org/10.1093/bioinformatics/bty655), Jonathan Laperle, Simon Hébert-Deschamps, Joanny Raby, David Anderson de Lima Morais, Michel Barrette, David Bujold Charlotte Bastin, Marc-Antoine Robert, Jean-François Nadeau, Marie Harel, Alexei Nordell-Markovits, Alain Veilleux, Guillaume Bourque, Pierre-Étienne Jacques. *Bioinformatics*, bty655, doi:10.1093/bioinformatics/bty655
- epiGeEC tagged publications in the Galaxy Publication Library
Sponsors
- Département d’informatique, Département de biologie, Centre de calcul scientifique, Faculté des sciences, [Université de Sherbrooke](https://www.usherbrooke.ca/), Sherbrooke, Québec, Canada
- [McGill University](https://www.mcgill.ca/) and [Génome Québec Innovation Center](http://gqinnovationcenter.com/index.aspx), Montréal, Québec, Canada
- Department of Human Genetics, McGill University, Montréal, Québec, Canada
- Centre de recherche du CHUS, Université de Sherbrooke, Sherbrooke, Québec, Canada