Galaxy Community Hub
Platform Directory

COMBAT-TB Workbench

Launch Galaxy
Container: COMBAT-TB Docker
Scope: Domain Specific
Summary: A modular, easy to install application that provides a web based environment for *Mycobacterium tuberculosis* bioinformatics

Comments

  • COMBAT-TB Workbench is built using two main software components: the IRIDA Platform for its web-based user interface and data management capabilities and the Galaxy bioinformatics workflow platform for workflow execution.

User Support

  • [GitHub issue reporting](https://github.com/COMBAT-TB/irida-galaxy-deploy/issues)

Quotas

  • None

Citations

  • Heusden, P. van, Mashologu, Z., Lose, T., Warren, R., & Christoffels, A. (2021). [The COMBAT-TB Workbench: Making powerful *M. tuberculosis* bioinformatics accessible](https://doi.org/10.1101/2021.09.23.21263983). *medRxiv*, 2021.09.23.21263983. https://doi.org/10.1101/2021.09.23.21263983
  • COMBAT-TB tagged publications in the Galaxy Publication Library

Sponsors

  • [South African Medical Research Council Bioinformatics Unit](https://www.samrc.ac.za/extramural-research-units/bioinformatics-capacity-development), [South African National Bioinformatics Institute](https://www.uwc.ac.za/study/all-areas-of-study/institutes/south-african-national-bioinformatics-institute/overview), University of the Western Cape, South Africa