BioCiphers Lab Galaxy

Public Server:	BioCiphers Galaxy (US)
Scope:	Tool Publishing
Summary:	BCL Galaxy gives a user friendly interface for analysis tools developed by the [BioCiphers Lab](http://biociphers.org/) at the University of Pennsylvania.

Comments

Please report any problems with any of the tools or ask questions regarding their use to [avispa AT biociphers DOT org](mailto:avispa AT biociphers DOT org)

[MAJIQ-SPEL: web-tool to interrogate classical and complex splicing variations from RNA-Seq data](https://doi.org/10.1093/bioinformatics/btx565), Christopher J Green, Matthew R Gazzara, Yoseph Barash. *Bioinformatics,* Volume 34, Issue 2, 15 January 2018, Pages 300–302, doi:10.1093/bioinformatics/btx565
[AVISPA: a web tool for the prediction and analysis of alternative splicing](https://doi.org/10.1186/gb-2013-14-10-r114), Yoseph Barash, Jorge Vaquero-Garcia, Juan González-Vallinas, Hui Yuan Xiong, Weijun Gao, Leo J Lee and Brendan J Frey. *Genome Biology* 201314:R114
[In silico to in vivo splicing analysis using splicing code models](https://doi.org/10.1016/j.ymeth.2013.11.006), Matthew R. Gazzara, Jorge Vaquero-Garcia, Kristen W. Lynch, Yoseph Barash. *Methods* Volume 67, Issue 1, 1 May 2014, Pages 3-12
BioCiphers tagged publications in the Galaxy Publication Library