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BioBix

Launch Galaxy
BioBix
Public Server: BioBix Galaxy (BE)
Scope: Genomics
Summary: A general genomics server. Includes the PROTEOFORMER pipeline tools.

Comments

  • Standard Galaxy genomics tools, plus PROTEOFORMER tools. PROTEOFORMER is a proteogenomic pipeline that delineates true *in vivo* proteoforms and generates a protein sequence search space for peptide to MS/MS matching.

User Support

  • [Email support](mailto:biobix_galaxy_admins@lists.ugent.be)

Quotas

  • Anonymous use is supported. Accounts can be requested.

Citations

  • [mQC: A post-mapping data exploration tool for ribosome profiling](https://doi.org/10.1016/j.cmpb.2018.10.018), Steven Verbruggen, Gerben Menschaert. *Computer Methods and Programs in Biomedicine*, doi:10.1016/j.cmpb.2018.10.018
  • BioBix tagged publications in the Galaxy Publication Library

Sponsors

  • [Lab of Computational Genomics & Bioinformatics Ghent University, Belgium](http://www.biobix.be/)