ZBIT Bioinformatics Toolbox

Public Server:	ZBIT Bioinformatics Toolbox (DE)
Scope:	Tool Publishing
Summary:	This customized version of the Galaxy webservice framework was set up to allow the public access of our bioinformatics tools. These tools were developed and implemented by members of the Department of Cognitive Systems at the University of Tübingen.

Comments

Includes these tools developed at Tübingen:
TFpredict: Identification and structural characterization of transcription factors
SABINE: Prediction of the binding specificity of transcription factors
SBML2LaTeX: Conversion of SBML files into human-readable reports
BioPAX2SBML: Conversion of BioPAX format to SBML qual
SBMLsqueezer: Generate kinetic rate equations for biochemical networks
EDISA: Extracting biclusters from multiple time-series of gene expression profiles
ModuleMaster: Finding cis-regulatory modules using promoter analysis and microarray expression data regression.

ZBIT Bioinformatics Toolbox: A Web-Platform for Systems Biology and Expression Data Analysis. Michael Römer, Johannes Eichner, Andreas Dräger, Clemens Wrzodek, Finja Wrzodek, Andreas Zell, PLOS One, February 16, 2016 doi:10.1371/journal.pone.0149263
ZBIT tagged publications in the Galaxy Publication Library