RNAcommender
Launch Galaxy
| Container: | Docker (IT) |
|---|---|
| Scope: | Tool Publishing |
| Summary: | RNAcommender is a tool for genome-wide recommendation of RNA-protein interactions. It is a recommender system capable of suggesting RNA targets to unexplored RNA binding proteins, by propagating the available interaction information, taking into account the protein domain composition and the RNA predicted secondary structure. |
Comments
- Available in Docker and in the Galaxy Toolshed.
Quotas
- None
Citations
- RNAcommender: genome-wide recommendation of RNA–protein interactions, Gianluca Corrado, Toma Tebaldi, Fabrizio Costa, Paolo Frasconi, Andrea Passerini, Bioinformatics, Volume 32, Issue 23, 1 December 2016, Pages 3627–3634, doi: 10.1093/bioinformatics/btw517
- RNAcommender tagged publications in the Galaxy Publication Library
Sponsors
- DISI - Department of Information Engineering and Computer Science, University of Trento, Italy