QBRC Galaxy
Launch Galaxy
| Public Server: | QBRC Galaxy (US) |
|---|---|
| Scope: | Tool Publishing |
| Summary: | Hosts custom tools developed by members of the Quantitative Biomedical Research Center @ University of Texas Southwestern for statistical analysis of various High Throughput Sequencing experiments. |
Comments
- Hosts custom tools developed by members of the Quantitative Biomedical Research Center @ University of Texas Southwestern for statistical analysis of various High Throughput Sequencing experiments.
- Features:
- SbacHTS: Spatial Background Noise Correction for HighThroughput RNAi Screening
- DecoRNAI (deconvolution analysis of RNAi screening data)
- MiClip "a novel model-based approach to identify high-confidence protein-RNA binding sites in CLIP-Seq datasets"
- Alse see the PIPE-CLIP server.
User Support
Citations
- A Model-Based Approach to Identify Binding Sites in CLIP-Seq Data by Wang, et al., PLoS ONE 9(4): e93248. doi:10.1371/journal.pone.0093248
- Detection of candidate tumor driver genes using a fully integrated Bayesian approach by Yang, et al., Statistics in Medicine, doi: 10.1002/sim.6066
- Design and bioinformatics analysis of genome-wide CLIP experiments by Wang, et al., Nucleic Acids Research (2015) doi: 10.1093/nar/gkv439
- QBRC tagged publications in the Galaxy Publication Library