IRProfiler
Launch Galaxy
| Container: | Docker image of the IRProfiler Galaxy toolbox |
|---|---|
| Scope: | Tool Publishing |
| Summary: | Immune Repertoire Profiler (IRProfiler), a novel software pipeline that delivers a number of core receptor repertoire quantification and comparison functionalities on high-throughput TR and BcR sequencing data. |
Comments
- Galaxy image that deploys IRProfiler, a novel Galaxy toolbox. This is made available as supplementary material for the article IRProfiler - A Software Toolbox for High Throughput Immune Receptor Profiling, authored by C. Maramis et al. in *BMC Bioinformatics
- A Docker image of the IRProfiler Galaxy toolbox is also available.
- IRProfiler tools are also available in the ToolShed
Citations
- IRProfiler - A Software Toolbox for High Throughput Immune Receptor Profiling, Christos Maramis, Athanasios Gkoufas, Anna Vardi, Evangelia Stalika, Kostas Stamatopoulos, Anastasia Hatzidimitriou, Nicos Maglaveras, Ioanna Chouvarda, BMC Bioinformatics (2018) 19: 144. doi:10.1186/s12859-018-2144-z
- IRProfiler tagged publications in the Galaxy Publication Library
Sponsors
- Lab of Computing, Medical Informatics & Biomedical-Imaging Technologies, Department of Medicine, Aristotle University of Thessaloniki, Thessaloniki, Greece
- Institute of Applied Biosiences, Centre for Research & Technology Hellas, Thermi Greece