News (29)
Viral pathogen data analysis beyond BY-COVID
A look back at the BY-COVID project and ahead to upcoming developments
Repurposing COVID-19 pipelines for the monkeypox virus
One aim of the BY-COVID project is to build a framework enabling data from newly emerging infectious disease threats to be made rapidly and widely accessible.
Galaxy taking part @ Elixir All Hands 2022
During 6-9th of June, members of the European Galaxy team travelled to Amsterdam to join the ELIXIR All Hands meeting 2022 where we joined other colleagues from ELIXIR-DE.
Omicron and SARS-CoV-2 genome surveillance
A first view of the Omicron lineage’s mutational pattern derived transparently and fully reproducibly from raw sequencing reads
BY-COVID: A new EU project for pandemic preparedness
A new €12 million Horizon Europe funded project which will tackle the data challenges that can hinder effective pandemic response.
New brochure from ELIXIR Germany
ELIXIR Germany has published the handout "ELIXIR GERMANY - Shaping the Bioinformatics Infrastructure for Life Sciences in Europe".
Updates from the ELIXIR Galaxy Community
An updated ELIXIR Galaxy website includes our goals, with a special emphasis on interactions with the local, domain-specific and global communities; plus much more
Two New Teaching Papers using Galaxy
Two hand-in-hand teaching papers have been published this week using Galaxy as a teaching platform.
COVID updates: B.1.617.2 detected in COG-UK data from the beginning of April
We checked the COG-UK data to see if we’d find representative samples of B.1.617.2 (one of the Indian lineages, and a Variant of Concern).
Monitoring of raw open data for SARS-CoV-2 genome surveillance
UseGalaxy.eu is now automatically collecting, and analyzing raw sequencing data published by the COVID-19 Genomics UK Consortium (COG-UK).
How to import a workflow from the Workflow Hub and run it on remote COVID-19 data
Galaxy-ELIXIR webinar series: Open Data Infrastructures to tackle COVID-19 pandemic
The European Galaxy server listed as an official resource on the COVID-19 Data Portal
Three articles related to COVID-19 research using Galaxy in the de.NBI brochure
Just part of how de.NBI is supporting COVID-19 research
ISMB 2020 conference videos available on YouTube
Variant Analysis of SARS-CoV-2 Sequencing Data (Jan 2021 update)
January 2021 update
The European Galaxy Server in 2020
What a shitty year! But it’s over and we hope you and your family are safe and healthy.
Activity report of the last 5 years of the Freiburg Galaxy Team
Crucial infrastructure serving more than 22,000 researchers